Soil Biodiversity, Bioplatforms Australia - Great Western Woodlands SuperSite, Credo, 2013

The Biome of Australian Soil Environments project used amplicon (bacterial 16S, archael 16S, fungal ITS and bacterial 18S) and shotgun metagenomics sequencing approaches to assess soil biodiversity across Australia. SuperSites provided soil samples for sequencing and contextual data.

Sample collection procedure, amplicon methods and OTU pipelines are available at http://www.bioplatforms.com/soil-biodiversity/

Reference: (2016) Bissett, A, Fitzgerald, A, et al. Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database. GigaScience 5:21. doi: 10.1186/s13472-016-0126-5

Soil Microbiome metabarcoding amplicon data and contextual data available from Bioplatforms Australia BASE data portal

Great Western Woodlands SuperSite, Credo data is available under the BASE codes:

Code Location Depth
102.100.100.13729 Core 1 ha, Salmon gum plot 0-10 cm
102.100.100.13730 Core 1 ha, Salmon gum plot 20-30 cm
102.100.100.13731 Gimlet Plot 0-10 cm
102.100.100.13732 Gimlet Plot 20-30 cm
102.100.100.13733 Redgum Plot 0-10 cm
102.100.100.13734 Redgum Plot 20-30 cm
102.100.100.13735 Blackbutt Plot 0-10 cm
102.100.100.13736 Blackbutt Plot 20-30 cm